Introduction to Structural bioinformatics

This article contains useful links and documents part of an introductory lecture given to lab member of the US2B laboratory (https://us2b.univ-nantes.fr) in October 2023. This page will be updated regularly to add useful information from their feedback.
As much as possible, the origin and references are given for a more complex introduction to the field, feel free to contact me for further precisions. The documents attached below are released under a permissive.
Previous introductions (…)

XmGrace day-to-day usage
17 August 2023, by S. Téletchéa

Before finding the wonderful XmGrace software, i’d loose time to do calculations, regressions, etc.
With this software, i’ve been able to do in a more robust manner and more rapidly everything i could do before and much more.
Here are some examples of what i’m using.
Some basics commands i (…)
Django setup with rdkit for chemoinformatics studies
17 August 2023, by S. Téletchéa

Although Rdkit and Django installation and deployment are well documented independently, it may become rapidly difficult to a newcomer to get a simple rdkit + django implementation working using a real apache backend. This article will detail how they can be implemented and used for a small (…)
DockNmine, a Web Portal to Assemble and Analyse Virtual and Experimental Interaction Data
17 August 2023, by S. Téletchéa

My latest article is published online, its objectives are to assemble virtual and experimental data on public and private ligands, in order to provide a broader overview of the performance of virtual screening studies.
You can find the complete article online, do not hesitate to contact me for (…)
What’s in a (Red Blood) Cell?
17 August 2023, by S. Téletchéa

The red blood cell is a metabolically-driven cell where protein synthesis or dna material is no more available. This specific cell is essential for life, and a tremendous amount of work has been performed to decipher the complexity of RBC during the cell differentiation process and its entire (…)
Adding timestamps in crontabs
17 August 2023, by S. Téletchéa

Crontab entries are great to periodically execute a command, but lack advanced logging facilities. This article will just highlight a rapid tip to enhance this situation.
The cron service is meant to execute periodically a given task, but it lacks a proper logging facility.
To add a specific (…)

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Introduction to Structural bioinformatics

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